Cultivating oleaginous microalgae in specific culturing devices such as raceways is seen as a future way to produce biofuel. The complexity of this process coupling non linear biological activity to hydrodynamics makes the optimization problem very delicate. The large amount of parameters to be taken into account paves the way for a useful mathematical modeling. Due to the heterogeneity of raceways along the depth dimension regarding temperature, light intensity or nutrients availability, we adopt a multilayer approach for hydrodynamics and biology. For free surface hydrodynamics, we use a multilayer Saint-Venant model that allows mass exchanges, forced by a simplified representation of the paddlewheel. Then, starting from an improved Droop model that includes light effect on algae growth, we derive a similar multilayer system for the biological part. A kinetic interpretation of the whole system results in an efficient numerical scheme. We show through numerical simulations in two dimensions that our approach is capable of discriminating between situations of mixed water or calm and heterogeneous pond. Moreover, we exhibit that a posteriori treatment of our velocity fields can provide lagrangian trajectories which are of great interest to assess the actual light pattern perceived by the algal cells and therefore understand its impact on the photosynthesis process.
Mots clés : hydrostatic Navier-Stokes equations, Saint-Venant equations, free surface stratified flows, multilayer system, kinetic scheme, droop model, raceway, hydrodynamics and biology coupling, algae growth
@article{M2AN_2013__47_5_1387_0, author = {Bernard, Olivier and Boulanger, Anne-C\'eline and Bristeau, Marie-Odile and Sainte-Marie, Jacques}, title = {A {2D} model for hydrodynamics and biology coupling applied to algae growth simulations}, journal = {ESAIM: Mathematical Modelling and Numerical Analysis }, pages = {1387--1412}, publisher = {EDP-Sciences}, volume = {47}, number = {5}, year = {2013}, doi = {10.1051/m2an/2013072}, mrnumber = {3100768}, language = {en}, url = {http://archive.numdam.org/articles/10.1051/m2an/2013072/} }
TY - JOUR AU - Bernard, Olivier AU - Boulanger, Anne-Céline AU - Bristeau, Marie-Odile AU - Sainte-Marie, Jacques TI - A 2D model for hydrodynamics and biology coupling applied to algae growth simulations JO - ESAIM: Mathematical Modelling and Numerical Analysis PY - 2013 SP - 1387 EP - 1412 VL - 47 IS - 5 PB - EDP-Sciences UR - http://archive.numdam.org/articles/10.1051/m2an/2013072/ DO - 10.1051/m2an/2013072 LA - en ID - M2AN_2013__47_5_1387_0 ER -
%0 Journal Article %A Bernard, Olivier %A Boulanger, Anne-Céline %A Bristeau, Marie-Odile %A Sainte-Marie, Jacques %T A 2D model for hydrodynamics and biology coupling applied to algae growth simulations %J ESAIM: Mathematical Modelling and Numerical Analysis %D 2013 %P 1387-1412 %V 47 %N 5 %I EDP-Sciences %U http://archive.numdam.org/articles/10.1051/m2an/2013072/ %R 10.1051/m2an/2013072 %G en %F M2AN_2013__47_5_1387_0
Bernard, Olivier; Boulanger, Anne-Céline; Bristeau, Marie-Odile; Sainte-Marie, Jacques. A 2D model for hydrodynamics and biology coupling applied to algae growth simulations. ESAIM: Mathematical Modelling and Numerical Analysis , Tome 47 (2013) no. 5, pp. 1387-1412. doi : 10.1051/m2an/2013072. http://archive.numdam.org/articles/10.1051/m2an/2013072/
[1] E Audusse, Modelisation hyperbolique et analyse numerique pour les ecoulements en eaux peu profondes. Ph.D. thesis. Université Pierre et Marie Curie - Paris VI (2004).
[2] Transport of pollutant in shallow water flows: A two time steps kinetic method. ESAIM: M2AN 37 (2003) 389-416. | Numdam | MR | Zbl
and ,[3] A well-balanced positivity preserving second-order scheme for shallow water flows on unstructured meshes. J. Comput. Phys. 206 (2005) 311-333. | MR | Zbl
and ,[4] Approximation of the hydrostatic Navier-Stokes system for density stratified flows by a multilayer model. Kinetic interpretation and numerical validation. J. Comput. Phys. 230 (2011) 3453-3478. | MR
, , and ,[5] A multilayer saint-venant system with mass exchanges for shallow water flows. Derivation and numerical validation. ESAIM: M2AN 45 (2011) 169-200. | Numdam | MR | Zbl
, , and ,[6] E. Audusse, F. Bouchut, M.-O. Bristeau, R. Klein and Be. Perthame, A fast and stable well-balanced scheme with hydrostatic reconstruction for shallow water flows. SIAM J. Sci. Comput. 25 (2004) 2050-2065. | MR | Zbl
[7] Phytoplankton growth formulation in marine ecosystem models: should we take into account photo-acclimation and variable stochiometry in oligotrophic areas? To appear in J. Marine Syst.
, , , , , and ,[8] Investigation of mechanistic formulations depicting phytoplankton dynamics for models of marine pelagic ecosystems and description of a new model. Progr. Oceanogr. 71 (2006) 1-33.
, , , and ,[9] A.-J.-C. Barré de Saint-Venant, Théorie du mouvement non permanent des eaux, avec application aux crues des rivières et làintroduction des marées dans leur lit. Comptes Rendus des Séances de l'Académie des Sciences, Paris 73 (1871) 147-154. | JFM
[10] Hurdles and challenges for modelling and control of microalgae for co2 mitigation and biofuel production. J. Process Control 21 (2011) 1378-1389.
,[11] Transient behavior of biological loop models, with application to the Droop model. Math. Biosci. 127 (1995) 19-43. | MR | Zbl
and ,[12] Global qualitative behavior of a class of nonlinear biological systems: application to the qualitative validation of phytoplankton growth models. Artif. Intel. 136 (2002) 29-59. | MR | Zbl
and ,[13] Analytical solutions for the free surface hydrostatic euler equations. Submitted to Nonlinearity (2011). | Zbl
and ,[14] C. boltzmann and navier-stokes, Research Report RR-2281, Projet MENUSIN. INRIA (1994).
, , , , ,[15] Derivation of a non-hydrostatic shallow water model; Comparison with Saint-Venant and Boussinesq systems. DCDS(B) 10 (2008) 733-759. | MR | Zbl
and ,[16] Numerical simulations of a non-hydrostatic shallow water model. Comput. Fluids 47 (2011) 51-64. | MR | Zbl
, and ,[17] A semi-implicit finite difference method for non-hydrostatic, free-surface flows. Int. J. Numer. Methods Fluids 30 (1999) 425-440. | Zbl
,[18] Biodiesel from microalgae. Biotech. Adv. 25 (2007) 294-306.
,[19] M.R. Droop, Vitamin B12 and marine ecology. IV. the kinetics of uptake growth and inhibition in Monochrysis lutheri. J. Mar. Biol. Assoc. 48 (1968) 689-733.
[20] M.R. Droop, 25 years of algal growth kinetics, a personal view. Botanica Marina 16 (1983) 99-112.
[21] Nutrient limitation in the sea: dynamics, identification and significance. Limnol. Oceanogr. 12 (1967) 685-695.
,[22] Numerical analysis of cumulative impact of phytoplankton photoresponses to light variation on carbon assimilation. J. Theor. Biol 261 (2009) 361-371. | MR
, , and ,[23] A dynamic regulatory model of phytoplanktonic acclimation to light, nutrients, and temperature. Limnol Oceanogr 43 (1998) 679-694.
, and ,[24] Derivation of viscous saint-venant system for laminar shallow water; numerical validation. Discrete Contin. Dyn. Syst. Ser. B 1 (2001) 89-102. | MR | Zbl
, and ,[25] Modeling algal productivity in large outdoor cultures and waste treatment systems. Biomass 21 (1990) 297-314.
, and ,[26] A macromodel for outdoor algal mass production. Biotechnol. Bioengineer. 35 (1990) 809-819.
, and ,[27] Photosynthesis-irradiance response at physiological level: a mechanistic model. J. Theoret. Biol. 213 (2001) 121-127.
,[28] A mechanistic model of algal photoinhibition induced by photodamage to photosystem-ii. J. Theoret. Biology 214 (2002) 519-527.
,[29] Hydrodynamics of Free Surface Flows: Modelling With the Finite Element Method. John Wiley and Sons (2007). | Zbl
,[30] Analysis of sediment transport modeling using computational fluid dynamics (cfd) for aquaculture raceways. Aquacult. Engrg. 31 (2004) 277-293.
, and ,[31] Use of computational fluid dynamics (cfd) for aquaculture raceway design to increase settling effectiveness. Aquacult. Engrg. 33 (2005) 167-180.
, and ,[32] Modeling algae growth in an open-channel raceway. J Comput. Biol. 17 (2010) 895-906. | MR
and ,[33] Maximum principle on the entropy and minimal limitations for kinetic schemes. Research Report RR-1628, Projet MENUSIN. INRIA (1992).
and ,[34] The attractiveness of the Droop equations. Math. Biosci. 111 (1992) 261-278. | MR | Zbl
and ,[35] Analyzing and modeling of photobioreactors by combining first principles of physiology and hydrodynamics. Biotechnol. Bioengineer. 85 (2004) 382-393.
and ,[36] Biodiversity and application of microalgae. J. Indust. Microbiol. Biotechnol. 17 (1996) 477-489.
,[37] The relationship between light intensity and photosynthesis: a simple mathematical model. Hydrobiol. Bull. 12 (1978) 134-136.
and ,[38] Cfd-aided optimization of a plate photobioreactor for cultivation of microalgae. Chemie Ingenieur Technik 74 (2002) 865-869.
, and ,[39] Simulations of light intensity variation in photobioreactors. J. Biotechnol. 131 (2007) 276-285.
and ,[40] Kinetic formulation of conservation laws. Oxford lecture series in mathematics and its applications. Oxford University Press (2002). | MR | Zbl
,[41] Numerical investigation of hydrodynamic and mixing conditions in a torus photobioreactor. Chemical Engineer. Sci. 61 (2006) 4476-4489.
, and ,[42] Microalgae for Oil: Strain Selection, Induction of Lipid Synthesis and Outdoor Mass Cultivation in a Low-Cost Photobioreactor. Biotechnol. Bioeng. 102 (2009) 100-112.
, , , , , and ,[43] Scale-down of microalgae cultivations in tubular photo-bioreactors - a conceptual approach. J. Biotechnol. 132 (2007) 127-133.
, , , and ,[44] Vertically averaged models for the free surface euler system. derivation and kinetic interpretation. Math. Models Methods Appl. Sci. 21 (2011) 459-490. | MR | Zbl
,[45] The limitations of continuous cultures with low rates of medium renewal per cell. J. Exp. Mar. Biol. Ecol. 178 (1994) 1-15.
and ,[46] Potential enhancement of photosynthetic energy conversion in algal mass culture. Biotechnol. Bioengineer. 30 (1987) 970-977.
, and .[47] Optimizing algal biomass production in an outdoor pond: a simulation model. J. Appl. Phycol. 3 (1991) 191-201.
, , , and ,[48] Photosynthetic efficiency of chlamydomonas reinhardtii in flashing light. Biotechnol. Bioengineer. 108 (2011) 2905-2913.
, , and ,[49] An outlook on microalgal biofuels. Science 329 (2010) 796-799.
and ,[50] Microalgae as biodiesel and biomass feedstocks: Review and analysis of the biochemistry, energetics and economics. Energy Environ. Sci. 3 (2010) 554-590.
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