We investigate the optimal alignment of two independent random sequences of length . We provide a polynomial lower bound for the probability of the optimal alignment to be macroscopically non-unique. We furthermore establish a connection between the transversal fluctuation and macroscopic non-uniqueness.
Mots-clés : longest common subsequence, path property, longitudinal fluctuation, transversed fluctuation
@article{PS_2007__11__281_0,
author = {Amsalu, Saba and Matzinger, Heinrich and Popov, Serguei},
title = {Macroscopic non-uniqueness and transversal fluctuation in optimal random sequence alignment},
journal = {ESAIM: Probability and Statistics},
pages = {281--300},
publisher = {EDP-Sciences},
volume = {11},
year = {2007},
doi = {10.1051/ps:2007014},
mrnumber = {2320822},
zbl = {1181.60141},
language = {en},
url = {http://archive.numdam.org/articles/10.1051/ps:2007014/}
}
TY - JOUR AU - Amsalu, Saba AU - Matzinger, Heinrich AU - Popov, Serguei TI - Macroscopic non-uniqueness and transversal fluctuation in optimal random sequence alignment JO - ESAIM: Probability and Statistics PY - 2007 SP - 281 EP - 300 VL - 11 PB - EDP-Sciences UR - http://archive.numdam.org/articles/10.1051/ps:2007014/ DO - 10.1051/ps:2007014 LA - en ID - PS_2007__11__281_0 ER -
%0 Journal Article %A Amsalu, Saba %A Matzinger, Heinrich %A Popov, Serguei %T Macroscopic non-uniqueness and transversal fluctuation in optimal random sequence alignment %J ESAIM: Probability and Statistics %D 2007 %P 281-300 %V 11 %I EDP-Sciences %U http://archive.numdam.org/articles/10.1051/ps:2007014/ %R 10.1051/ps:2007014 %G en %F PS_2007__11__281_0
Amsalu, Saba; Matzinger, Heinrich; Popov, Serguei. Macroscopic non-uniqueness and transversal fluctuation in optimal random sequence alignment. ESAIM: Probability and Statistics, Tome 11 (2007), pp. 281-300. doi : 10.1051/ps:2007014. http://archive.numdam.org/articles/10.1051/ps:2007014/
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